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BMED-4460: Biological Imaging Analysis
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<meta property="og:title" content="BMED-4460: Biological Imaging Analysis">
<meta property="og:description" content="Survey of image analysis applications in biology and biotechnology; introduction to biological microscopy and selected biomedical imaging systems; image reconstruction and pre-processing; grayscale and geometric corrections; image segmentation; blob analysis, cell/colony counting, and cell morphometry; vessel and neuron tracing algorithms with applications to neurobiology and medicine; feature extraction, pattern analysis, cluster analysis and classification; image registration algorithms with applications to mosaicing, spatial referencing, motion estimation, and change detection.">
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Biological Imaging Analysis
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<h2 id="code">
BMED-4460
</h2>
<p>
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Survey of image analysis applications in biology and biotechnology; introduction to biological microscopy and selected biomedical imaging systems; image reconstruction and pre-processing; grayscale and geometric corrections; image segmentation; blob analysis, cell/colony counting, and cell morphometry; vessel and neuron tracing algorithms with applications to neurobiology and medicine; feature extraction, pattern analysis, cluster analysis and classification; image registration algorithms with applications to mosaicing, spatial referencing, motion estimation, and change detection.
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3 credits
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Cross-listed with:
</div>
<div id=crosslist-classes" class="rel-info-courses">
<a class="course-pill" href="BMED-6460">BMED-6460 Biological Imaging Analysis</a>
</div>
</div>
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Prereqs:
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<div id="prereq-classes" class="rel-info-courses">
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<a class="course-pill" href="BMED-2300">BMED-2300 Bioimaging and Bioinstrumentation</a>
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<table id="years-table">
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<thead>
<tr>
<th></th>
<th class="spring season-label">Spring</th>
<th class="summer season-label" colspan="2">Summer</th>
<th class="fall season-label">Fall</th>
</tr>
<tr>
<th colspan="2"></th>
<th class="summer2 midsum-label">(Session 1)</th>
<th class="summer3 midsum-label">(Session 2)</th>
<th></th>
</tr>
</thead>
<tbody>
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<tr>
<th class="year">2024</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=202401&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
2024-01-17 22:27:40 +00:00
Seats Taken: 14/15
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</span>
</div>
</td>
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<td colspan="2" class="term summer not-offered">
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</td>
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<td class="term fall not-offered">
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</td>
</tr>
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<tr>
<th class="year">2023</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
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<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=202301&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
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</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
2023-03-02 19:07:58 +00:00
Seats Taken: 7/15
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</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2022</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
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<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=202201&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
2023-02-10 04:02:50 +00:00
</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
Seats Taken: 8/15
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2021</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=202101&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
2023-02-10 04:02:50 +00:00
</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
Seats Taken: 4/25
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2020</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=202001&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
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</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
Seats Taken: 0/25
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2019</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=201901&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
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</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
Seats Taken: 9/25
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2018</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=201801&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
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</span>
<ul class="prof-list">
<li>Pingkun Yan</li>
</ul>
<span class="course-capacity">
Seats Taken: 2/25
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2017</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=201701&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
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</span>
<ul class="prof-list">
<li>Alberto Santamaria Pang</li>
</ul>
<span class="course-capacity">
Seats Taken: 6/30
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2016</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=201601&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
2023-02-10 04:02:50 +00:00
</span>
<ul class="prof-list">
<li>Alberto Santamaria Pang</li>
</ul>
<span class="course-capacity">
Seats Taken: 6/15
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2015</th>
<td class="term spring offered">
<div class="view-container detail-view-container">
<span class="term-course-info">
2023-04-05 18:33:00 +00:00
<a href="https://sis.rpi.edu/rss/bwckctlg.p_disp_listcrse?term_in=201501&subj_in=BMED&crse_in=4460&schd_in=">Biological Image Analysis (3c)</a>
2023-02-10 04:02:50 +00:00
</span>
<ul class="prof-list">
<li>Erhan Bas</li>
</ul>
<span class="course-capacity">
Seats Taken: 1/15
</span>
</div>
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2014</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2013</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2012</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2011</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2010</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2009</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2008</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2007</th>
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<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2006</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2005</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2004</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2003</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2002</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2001</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">2000</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">1999</th>
<td class="term spring not-offered">
</td>
<td colspan="2" class="term summer not-offered">
</td>
<td class="term fall not-offered">
</td>
</tr>
<tr>
<th class="year">1998</th>
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<td class="term spring unscheduled">
</td>
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<td colspan="2" class="term summer not-offered">
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</td>
<td class="term fall not-offered">
</td>
</tr>
</tbody>
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